Getting this information from scatngs

cancerit / ascatNgs

Somatic copy number analysis using WGS paired end wholegenome sequencing

http://cancerit.github.io/ascatNgs/

GNU Affero General Public License v3.0

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Closed beginner984 closed 4 years ago

beginner984 commented 4 years ago

How and where I can get main copy number state for a sample? For example how I know if a sample is AAB(34%)?

Thank you for any help

keiranmraine commented 4 years ago

Please see the "Guidelines for Understanding Results" section of the protocols paper linked from the wiki.