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cancerit / cgpCaVEManPostProcessing

Flagging add on to CaVEMan
http://cancerit.github.io/cgpCaVEManPostProcessing/
GNU Affero General Public License v3.0
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Misleading command line help: convertVCFUnmatchedToBed.pl -infile #38

Open keiranmraine opened 4 years ago

keiranmraine commented 4 years ago

This option does not take a list of files. It takes the path to a single *.vcf.gz file.

https://github.com/cancerit/cgpCaVEManPostProcessing/blob/1f83dd23f97df1b984e0718a95deb63cc09f6f77/bin/convertVCFUnmatchedToBed.pl#L284