cancerit / cgpCaVEManWrapper

Reference implementation of CGP workflow for CaVEMan SNV analysis
http://cancerit.github.io/cgpCaVEManWrapper/
GNU Affero General Public License v3.0
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WIP: review only #37

Closed keiranmraine closed 5 years ago

keiranmraine commented 5 years ago

Fix bug in command line arg parsing when using short names

keiranmraine commented 5 years ago

@drjsanger, I'd say investigate if you know of any other args that use upper-case to make them unique.

Catchup at standup