Closed keiranmraine closed 3 years ago
Are there no changes required for CaVEMan core w.r.t. libdeflate that need to go into this?
@davidrajones no, as shown above the caveman binary is linking libdeflate as htslib is using it under the hood.
You may want to add something to the CaVEMan install/wiki about compiling htslib with libdeflate.
For sanity check only
Trivial review, using libdeflate compiled htslib for caveman requires only updating the base container:
Internal CI shows following CPU time differences:
Improvement is using formular
new/old*100%
, where the result shows the percentage of the original time it now takes.