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cancerit / cgpPindel

Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel
http://cancerit.github.io/cgpPindel/
GNU Affero General Public License v3.0
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using the docker container of cgpPINDEL #63

Closed tanasa closed 6 years ago

tanasa commented 6 years ago

Dear all,

as I am new to Docker container technology, thought that i may ask please which precise steps shall I follow in order to install cgpPINDEL and its dependencies on our server, and have it ready to run ?

thank you,

-- bogdan

keiranmraine commented 6 years ago

Depending on your data type please see the documentation on:

https://github.com/cancerit/dockstore-cgpwxs or https://github.com/cancerit/dockstore-cgpwgs

We cannot provide support for the installation of Docker itself.

If you require further support in the use of the containers please raise a query on the above repositories.

Regards, Keiran