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candYgene / pbg-ld

Linked Data Platform for Plant Breeding & Genomics
https://research-software.nl/software/pbg-ld
Apache License 2.0
2 stars 5 forks source link

No triples for the graph http://www.uniprot.org/proteomes/Solanum_tuberosum #23

Closed gurnoor1990 closed 5 years ago

gurnoor1990 commented 5 years ago

Output of the test.py function

http://plants.ensembl.org/Solanum_tuberosum 11976134
http://solgenomics.net/genome/Solanum_pennellii 11330901
http://plants.ensembl.org/Solanum_lycopersicum  9467605
http://solgenomics.net/genome/Solanum_tuberosum 8894226
http://solgenomics.net/genome/Solanum_lycopersicum  7747361
http://www.uniprot.org/proteomes/Solanum_lycopersicum   4525375
http://purl.obolibrary.org/obo/go.owl   1405083
http://purl.obolibrary.org/obo/po.owl   60459
http://purl.obolibrary.org/obo/so.owl   41586
http://purl.obolibrary.org/obo/pato.owl 33947
http://purl.obolibrary.org/obo/to.owl   27020
http://semanticscience.org/ontology/sio.owl 15237
http://europepmc.org/articles   9063
http://purl.bioontology.org/ontology/SPTO   6537
http://purl.obolibrary.org/obo/ro.owl   5415
http://purl.uniprot.org/core/   2729
http://biohackathon.org/resource/faldo.rdf  232
http://www.uniprot.org/proteomes/Solanum_tuberosum  0
arnikz commented 5 years ago

Try the latest commit https://github.com/candYgene/pbg-ld/commit/e19ebd09e3b0773fb16196d88ffd5b96e222eb54.

graph_uri   n_triples

http://plants.ensembl.org/Solanum_tuberosum 11976108
http://solgenomics.net/genome/Solanum_pennellii 11330384
http://plants.ensembl.org/Solanum_lycopersicum  9467592
http://www.uniprot.org/proteomes/Solanum_tuberosum  8875951
http://solgenomics.net/genome/Solanum_tuberosum 8823762
http://solgenomics.net/genome/Solanum_lycopersicum  7738542
http://www.uniprot.org/proteomes/Solanum_lycopersicum   6594669
http://purl.obolibrary.org/obo/go.owl   1405083
http://purl.obolibrary.org/obo/po.owl   60459
http://purl.obolibrary.org/obo/so.owl   41586
http://purl.obolibrary.org/obo/pato.owl 33947
http://purl.obolibrary.org/obo/to.owl   27020
http://semanticscience.org/ontology/sio.owl 15237
http://europepmc.org/articles   8710
http://purl.bioontology.org/ontology/SPTO   6537
http://purl.obolibrary.org/obo/ro.owl   5415
http://purl.uniprot.org/core/   2729
http://biohackathon.org/resource/faldo.rdf  232
gurnoor1990 commented 5 years ago

Solved