cannin graph_neural_network_drug_response issues

cannin / graph_neural_network_drug_response

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Create datasets for rcellminer

#21 inoue0426 opened 2 years ago
1
Document Functions

#20 cannin opened 2 years ago
2
Understand RLIPP and implement (or use) it for describing the result with biological background

#19 inoue0426 opened 2 years ago
6
[#17] add script for visualization

#18 inoue0426 closed 2 years ago
0
Weight visualization using networkx and cytoscape

#17 inoue0426 opened 2 years ago
7
6 run drugcell model on cellminercdb data

#16 inoue0426 closed 2 years ago
0
Running DrugCell on binder occurs OOM probably.

#15 inoue0426 opened 2 years ago
3
2 reformat cellminer cdb data for drug cell

#14 inoue0426 closed 2 years ago
0
Re-train DrugCell model

#13 inoue0426 opened 2 years ago
8
[#8] add binder envs

#12 inoue0426 closed 2 years ago
0
Need to replace SMILES from rcellminer to DrugCell

#11 inoue0426 opened 2 years ago
2
Document Work for Week 1

#10 cannin opened 2 years ago
0
Share cell line match table

#9 inoue0426 opened 2 years ago
2
Document Project Dependencies

#8 cannin opened 2 years ago
5
Train Benchmark AutoML Model

#7 cannin opened 2 years ago
2
Run DrugCell Model on CellMinerCDB Data

#6 cannin opened 2 years ago
1
Generate Equivalent Predictive Outputs from Models for Comparison

#5 cannin opened 2 years ago
0
Code Completeness Checklist

#4 cannin opened 2 years ago
0
Reformat CellMinerCDB Data for DrugCell

#2 cannin opened 2 years ago
2
Setup GSOC Blog

#1 cannin closed 2 years ago
6