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cansyl / DEEPScreen

DEEPScreen: Virtual Screening with Deep Convolutional Neural Networks Using Compound Images
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training model _ another species #11

Closed RN-Taka closed 3 years ago

RN-Taka commented 3 years ago

Hi, if i have interactions (Drugs-targets) with other organisms (not human), is it possible to run the training model? or it is specific for human?

thank you!

tuncadogan commented 3 years ago

Hi, yes it is possible, in fact, some of the targets that we prepare datasets for are non-human proteins. The important point here is that target protein should have a decent number of interacting/non-interacting ligand data points in the source bioactivity databases.