Closed r-trimbour closed 5 months ago
New Hummus_Object class created, replacing hummus_object that can be created from Seurat v4 and v5 objects.
Hummus_Object
hummus_object
Initiate_Hummus_Object function, to create Hummus_Object from SeuratObject.
Initiate_Hummus_Object
SeuratObject
Updated vignette accordingly, and recommending now there too to use GRNBoost2 for large scRNA-seq datasets.
hummuspy updated to depend on scipy>1.8.0 since previous version seems associated to memory leak issues
hummuspy
scipy>1.8.0
New
Hummus_Objectclass created, replacinghummus_objectthat can be created from Seurat v4 and v5 objects.Initiate_Hummus_Objectfunction, to createHummus_ObjectfromSeuratObject.Updated vignette accordingly, and recommending now there too to use GRNBoost2 for large scRNA-seq datasets.
hummuspyupdated to depend onscipy>1.8.0since previous version seems associated to memory leak issues