Closed gfragiadakis closed 5 years ago
bioinformatist
commented
5 years ago I also meet this problem when use latest sourcetracker2.
I try ipcontroller --ip=* but it does not works too.
This is content of my /etc/hosts:
127.0.0.1 localhost
127.0.1.1 Metabiolab-server
::1 localhost ip6-localhost ip6-loopback
ff02::1 ip6-allnodes
ff02::2 ip6-allroutersCan you help us? @johnchase Thank you!
johnchase
commented
5 years ago Unfortunately I don't have a good solution for this. This is an issue with ipyparallel, and I don't know of a good workaround. The issue in is posted in ipyparallel https://github.com/ipython/ipyparallel/issues/316
We have discussed moving away from ipyparallel as a dependency and I believe this is how we should move forward https://github.com/biota/sourcetracker2/issues/92
When running sourcetracker2 I get this warning message:
/home/gabif/miniconda3/envs/st2/lib/python3.5/site-packages/ipyparallel/client/client.py:458: RuntimeWarning: Controller appears to be listening on localhost, but not on this machine. If this is true, you should specify Client(...,sshserver='you@mac-nugget') or instruct your controller to listen on an external IP. RuntimeWarning)
Everything runs fine, the job completes and the files get written, but this connection doesn't get hung up (and I need to ctrl-C it once checking the output is there).