carlopacioni / vortexR

an R package for post Vortex simulation analysis
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Error: package or namespace load failed for 'vortexR' #41

Closed faresdhane closed 4 years ago

faresdhane commented 4 years ago

Hi,

I'm trying to download the package, I followed all the steps (JDK, Java, libraries rJava and glmulti) but I always have the same issue, it doesn't work.

R version 3.6.3 (2020-02-29) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 18363)

Matrix products: default

locale: [1] LC_COLLATE=English_Canada.1252 LC_CTYPE=English_Canada.1252 LC_MONETARY=English_Canada.1252 [4] LC_NUMERIC=C LC_TIME=English_Canada.1252

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] forcats_0.5.0 stringr_1.4.0 dplyr_0.8.5 purrr_0.3.3 readr_1.3.1 tidyr_1.0.2
[7] tibble_3.0.0 ggplot2_3.3.0 tidyverse_1.3.0

loaded via a namespace (and not attached): [1] Rcpp_1.0.4.6 cellranger_1.1.0 pillar_1.4.3 compiler_3.6.3 dbplyr_1.4.2 tools_3.6.3
[7] lubridate_1.7.8 jsonlite_1.6.1 lifecycle_0.2.0 nlme_3.1-144 gtable_0.3.0 lattice_0.20-38 [13] pkgconfig_2.0.3 rlang_0.4.5 reprex_0.3.0 cli_2.0.2 DBI_1.1.0 rstudioapi_0.11 [19] haven_2.2.0 withr_2.1.2 xml2_1.3.1 httr_1.4.1 fs_1.4.1 generics_0.0.2
[25] vctrs_0.2.4 hms_0.5.3 grid_3.6.3 tidyselect_1.0.0 glue_1.4.0 R6_2.4.1
[31] fansi_0.4.1 readxl_1.3.1 modelr_0.1.6 magrittr_1.5 backports_1.1.6 scales_1.1.0
[37] ellipsis_0.3.0 rvest_0.3.5 assertthat_0.2.1 colorspace_1.4-1 stringi_1.4.6 munsell_0.5.0

and this is the error message:

There is a binary version available but the source version is later: binary source needs_compilation vortexR 1.1.6 1.1.7 FALSE

installing the source package ‘vortexR’

trying URL 'http://cran.r-project.org/src/contrib/vortexR_1.1.7.tar.gz' Content type 'application/x-gzip' length 695975 bytes (679 KB) downloaded 679 KB

Error: loading failed Execution halted *** arch - x64 ERROR: loading failed for 'i386'

The downloaded source packages are in ‘C:\Users\fsdha\AppData\Local\Temp\RtmpU9lvYQ\downloaded_packages’

Any suggestion for how can I fix this problem?

carlopacioni commented 4 years ago

Hi, it looks like something went wrong with the 32 bit installation of rJava, probably you only have installed the 64 bit version of JDK. You should be able to solve this by installing the 32-bit version of Java or, if you only use the 64 bit of R, remove its 32 bit installation.

Cheers, carlo

On Sun, Apr 12, 2020 at 6:03 PM faresdhane notifications@github.com wrote:

Hi,

I'm trying to download the package, I followed all the steps (JDK, Java, libraries rJava and glmulti) but I always have the same issue, it doesn't work.

R version 3.6.3 (2020-02-29) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 18363)

and this is the error message:

There is a binary version available but the source version is later: binary source needs_compilation vortexR 1.1.6 1.1.7 FALSE

installing the source package ‘vortexR’

trying URL 'http://cran.r-project.org/src/contrib/vortexR_1.1.7.tar.gz' Content type 'application/x-gzip' length 695975 bytes (679 KB) downloaded 679 KB

  • installing source package 'vortexR' ... package 'vortexR' successfully unpacked and MD5 sums checked using staged installation R data inst byte-compile and prepare package for lazy loading help installing help indices converting help for package 'vortexR' finding HTML links ... done CompileIter html Nadults html Ne html Pextinct html PrefixAndRepeat html SSMD_matrix html collate_dat html collate_one_dat html collate_proc_data html collate_run html collate_yr html conv_l_yr html df2disk html dot_plot html fit_regression html get_file_paths html line_plot_year html line_plot_year_mid html lookup_table html m_scatter html pac.clas.Nadults html pac.clas.Ne html pac.clas html pac.clas.lookup html pac.clas.pairw html pac.lhs html pac.run.lhs html pac.yr html pairwise html pval html rRec html se2sd html sta.evy5 html sta.evy5.b11 html sta.main html vortexR html building package indices installing vignettes testing if installed package can be loaded from temporary location arch - i386 Error: package or namespace load failed for 'vortexR': .onLoad failed in loadNamespace() for 'rJava', details: call: inDL(x, as.logical(local), as.logical(now), ...) error: unable to load shared object 'C:/Users/fsdha/Documents/R/win-library/3.6/rJava/libs/i386/rJava.dll': LoadLibrary failure: %1 is not a valid Win32 application.

Error: loading failed Execution halted *** arch - x64 ERROR: loading failed for 'i386'

  • removing 'C:/Users/fsdha/Documents/R/win-library/3.6/vortexR' Warning in install.packages : installation of package ‘vortexR’ had non-zero exit status

The downloaded source packages are in ‘C:\Users\fsdha\AppData\Local\Temp\RtmpU9lvYQ\downloaded_packages’

Any suggestion for how can I fix this problem?

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faresdhane commented 4 years ago

It worked! Thank you. Cheers

carlopacioni commented 4 years ago

;-)

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From: faresdhane notifications@github.com Sent: Tuesday, April 14, 2020 9:20:42 PM To: carlopacioni/vortexR vortexR@noreply.github.com Cc: carlopacioni carlo.pacioni@gmail.com; Comment comment@noreply.github.com Subject: Re: [carlopacioni/vortexR] Error: package or namespace load failed for 'vortexR' (#41)

Closed #41https://github.com/carlopacioni/vortexR/issues/41.

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