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carlos-alberto-silva / rGEDI

rGEDI: An R Package for NASA's Global Ecosystem Dynamics Investigation (GEDI) Data Visualization and Processing.
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HDF5 file won't open - unable to read superblock - file signature not found #7

Closed philippgaertner closed 4 years ago

philippgaertner commented 4 years ago

Any idea what I am missing?

files[1] [1] "GEDI01_B_2019108032534_O01961_T03911_02_003_01.h5" gedilevel1b<-readLevel1B(level1Bpath = files[1])

Error in H5File.open(filename, mode, file_create_pl, file_access_pl) : HDF5-API Errors:

error #000: ../../src/hdf5-1.10.0-1/src/H5F.c in H5Fopen(): line 579: unable to open file
    class: HDF5
    major: File accessibilty
    minor: Unable to open file

error #001: ../../src/hdf5-1.10.0-1/src/H5Fint.c in H5F_open(): line 1208: unable to read superblock
    class: HDF5
    major: File accessibilty
    minor: Read failed

error #002: ../../src/hdf5-1.10.0-1/src/H5Fsuper.c in H5F__super_read(): line 273: file signature not found
    class: HDF5
    major: File accessibilty
    minor: Not an HDF5 file
carlos-alberto-silva commented 4 years ago

files[1] seems to not be the complete path to the h5.

Best Regards,

Carlos A. Silva, Ph.D. University of Maryland Phone: +55 (31) 99663-0407 carlos_engflorestal@outlook.com CV: http://lattes.cnpq.br/4116817121389727 Web-LiDAR: https://www.facebook.com/groups/1504561379790934/?ref=bookmarks Guest Editor: https://www.mdpi.com/journal/remotesensing/special_issues/carbon_storage_measurement https://www.mdpi.com/journal/remotesensing/special_issues/LiDAR_RS_Forest_Resources_Wildland_Fireshttps://www.mdpi.com/journal/remotesensing/special_issues/DFMED https://www.mdpi.com/journal/forests/special_issues/RS_disturb https://www.mdpi.com/journal/remotesensing/special_issues/Drones_Ecology_and_Conservation https://www.mdpi.com/journal/remotesensing/special_issues/LiDAR_RS_Forest_Resources_Wildland_Fires

From: Philipp Gärtner notifications@github.com Sent: Sunday, March 22, 2020 2:40 AM To: carlos-alberto-silva/rGEDI rGEDI@noreply.github.com Cc: Subscribed subscribed@noreply.github.com Subject: [carlos-alberto-silva/rGEDI] HDF5 file won't open - unable to read superblock - file signature not found (#7)

Any idea what I am missing?

files[1] [1] "GEDI01_B_2019108032534_O01961_T03911_02_003_01.h5" gedilevel1b<-readLevel1B(level1Bpath = files[1])

Error in H5File.open(filename, mode, file_create_pl, file_access_pl) : HDF5-API Errors:

error #000: ../../src/hdf5-1.10.0-1/src/H5F.c in H5Fopen(): line 579: unable to open file class: HDF5 major: File accessibilty minor: Unable to open file

error #001: ../../src/hdf5-1.10.0-1/src/H5Fint.c in H5F_open(): line 1208: unable to read superblock class: HDF5 major: File accessibilty minor: Read failed

error #002: ../../src/hdf5-1.10.0-1/src/H5Fsuper.c in H5F__super_read(): line 273: file signature not found class: HDF5 major: File accessibilty minor: Not an HDF5 file

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