speed up multiple projections by storing uncorrected PCA embeddings of ref

carmonalab / ProjecTILs

Interpretation of cell states using reference single-cell maps

GNU General Public License v3.0

231 stars 27 forks source link

speed up multiple projections by storing uncorrected PCA embeddings of ref #59

Open sjcarmona opened 1 year ago

sjcarmona commented 1 year ago

FindAnchors.STACAS() could use a parameter to store and re-use PCA embeddings of (unscaled) reference object. Currently this is re-calculated in every iteration.