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carmonalab / UCell

Gene set scoring for single-cell data
GNU General Public License v3.0
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struggling to instal package #19

Closed ncedi12 closed 2 years ago

ncedi12 commented 2 years ago

Hi there, I am really interested in using your package but I just cannot install it. It seems as though the dependencies do not get installed, which prevents the package being rejected. the problem arises with UCell installation. As below

remotes::installgithub("carmonalab/UCell", ref="v1.3") Downloading GitHub repo carmonalab/UCell@v1.3 ✓ checking for file ‘/private/var/folders/z/4dkjn12140n0hywjwxf06gdc0000gn/T/RtmpqC3oae/remotesee0b658e96d2/carmonalab-UCell-f815356/DESCRIPTION’ ... ─ preparing ‘UCell’: ✓ checking DESCRIPTION meta-information ... ─ checking for LF line-endings in source and make files and shell scripts ─ checking for empty or unneeded directories ─ building ‘UCell_1.3.1.tar.gz’

Error in file(filename, "r", encoding = encoding) : cannot open the connection Calls: source -> file In addition: Warning message: In file(filename, "r", encoding = encoding) : cannot open file 'renv/activate.R': No such file or directory Execution halted Warning message: In i.p(...) : installation of package ‘/var/folders/z_/4dkjn12140n0hywjwxf06gdc0000gn/T//RtmpqC3oae/fileee0b744fe914/UCell_1.3.1.tar.gz’ had non-zero exit status

Please advise as to how I can overcome this issue.

mass-a commented 2 years ago

Hello, can you tell us what is your OS, R version and the result of running sessionInfo()?