carmonalab / UCell

Gene set scoring for single-cell data
GNU General Public License v3.0
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Installing UCell on R-4.1 and Bioconductor < 3.15 #23

Closed vkartha closed 1 year ago

vkartha commented 1 year ago

Hi there - I was interested in installing this since it is a dependency for scGate. However, I'm running R v 4.1.2, and this won't install for R < 4.2

Error: package 'UCell' requires R >= 4.2.0

Is there a reason there is a subversion constraint that prohibits someone with R >4.0. from running this? I also wasn't able to download it from Bioconductor because of the BioCManager version (similar, it's not that old, but requires a later version:

package ‘UCell’ is not available for Bioconductor version '3.14' )

Thanks

mass-a commented 1 year ago

Hello Vinay

you can install previous versions of UCell from Github by specifying the version tag, e.g.:

remotes::install_github("carmonalab/UCell", ref="v2.0")

In your case version 2.0 should be compatible with R-4.1.

Best -m