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carpentries-incubator / SDC-BIDS-dMRI

Introduction to dMRI
https://carpentries-incubator.github.io/SDC-BIDS-dMRI/
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Add script to sync the `Binder` environment package versions with the `requirements.txt` files' #228

Open jhlegarreta opened 1 year ago

jhlegarreta commented 1 year ago

Add a script that keeps the package versions in the requirements.txt file and the Binder instance in its environment.yml file in sync.

It could be a Python script that reads the versions of each package in the requirements.txt file and uses a regex to bump the ones in the binder environtment.yml file.

Related to issue #226.

jhlegarreta commented 1 year ago

May not be necessary: https://mybinder.readthedocs.io/en/latest/using/config_files.html#requirements-txt-install-a-python-environment

We may get away with it copying the top-level requirements.txt file, or making Binder use the top-level one if possible.

jhlegarreta commented 1 year ago

On a slightly related note, testing that Binder is correctly launched can also be relevant: https://discourse.jupyter.org/t/how-to-build-mybinder-image-automatically-at-each-commit/5381