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carpentries-incubator / bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
https://carpentries-incubator.github.io/bioc-rnaseq
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Populate episodes 7 and 8 #52

Closed csoneson closed 1 year ago

github-actions[bot] commented 1 year ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/carpentries-incubator/bioc-rnaseq/compare/md-outputs..md-outputs-PR-52

The following changes were observed in the rendered markdown documents:

 01-intro-to-rnaseq.md                              |   2 +-
 07-next-steps.md                                   |  33 ++-
 08-extra-design.md                                 | 302 +++++++++++++++++----
 LICENSE.md                                         |   4 +-
 ...ntial-expression-rendered-unnamed-chunk-8-1.png | Bin 20312 -> 20308 bytes
 ...08-extra-design-rendered-unnamed-chunk-10-1.png | Bin 23304 -> 16181 bytes
 ...08-extra-design-rendered-unnamed-chunk-11-1.png | Bin 16096 -> 23304 bytes
 ...a-design-rendered-unnamed-chunk-11-2.png (gone) | Bin 15450 -> 0 bytes
 ...ra-design-rendered-unnamed-chunk-12-1.png (new) | Bin 0 -> 19088 bytes
 ...ra-design-rendered-unnamed-chunk-12-2.png (new) | Bin 0 -> 19957 bytes
 fig/08-extra-design-rendered-unnamed-chunk-7-1.png | Bin 10802 -> 6128 bytes
 fig/08-extra-design-rendered-unnamed-chunk-8-1.png | Bin 14059 -> 10802 bytes
 fig/08-extra-design-rendered-unnamed-chunk-9-1.png | Bin 16181 -> 14059 bytes
 md5sum.txt                                         |  36 +--
 14 files changed, 302 insertions(+), 75 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2023-07-15 09:49:44 +0000