carpentries-incubator / bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
https://carpentries-incubator.github.io/bioc-rnaseq
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Changes7 26 #65

Closed jdrnevich closed 1 year ago

github-actions[bot] commented 1 year ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/carpentries-incubator/bioc-rnaseq/compare/md-outputs..md-outputs-PR-65

The following changes were observed in the rendered markdown documents:

 01-intro-to-rnaseq.md                              |  17 +++-
 03-import-annotate.md                              |  86 +++++++++++++++++----
 04-exploratory-qc.md                               |  56 +++++++++++---
 download_data.R                                    |  10 ++-
 ...-exploratory-qc-rendered-unnamed-chunk-10-1.png | Bin 12269 -> 30029 bytes
 ...ratory-qc-rendered-unnamed-chunk-11-1.png (new) | Bin 0 -> 12269 bytes
 ...4-exploratory-qc-rendered-unnamed-chunk-6-1.png | Bin 16321 -> 8759 bytes
 ...4-exploratory-qc-rendered-unnamed-chunk-7-1.png | Bin 12063 -> 16321 bytes
 ...4-exploratory-qc-rendered-unnamed-chunk-8-1.png | Bin 16185 -> 12063 bytes
 ...4-exploratory-qc-rendered-unnamed-chunk-9-1.png | Bin 30029 -> 16185 bytes
 ...tial-expression-rendered-unnamed-chunk-19-1.png | Bin 20319 -> 22599 bytes
 md5sum.txt                                         |   8 +-
 12 files changed, 143 insertions(+), 34 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2023-07-27 16:20:56 +0000