search

carpentries-incubator / bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
https://carpentries-incubator.github.io/bioc-rnaseq
Other
19 stars 28 forks source link

Data description + minor edits #83

Closed csoneson closed 11 months ago

github-actions[bot] commented 11 months ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/carpentries-incubator/bioc-rnaseq/compare/md-outputs..md-outputs-PR-83

The following changes were observed in the rendered markdown documents:

 03-import-annotate.md                              |   7 +-
 04-exploratory-qc.md                               |   8 +--
 05-differential-expression.md                      |  14 ++--
 07-gene-set-analysis.md                            |  71 ++++++++++-----------
 fig/04-exploratory-qc-rendered-pca-exercise-1.png  | Bin 15088 -> 14879 bytes
 ...erential-expression-rendered-heatmap-time-1.png | Bin 22620 -> 22618 bytes
 fig/07-gene-set-analysis-rendered-hypergeom-1.png  | Bin 191050 -> 190993 bytes
 md5sum.txt                                         |   8 +--
 8 files changed, 54 insertions(+), 54 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2023-09-17 11:44:07 +0000