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carpentries-incubator / bioc-rnaseq

Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
https://carpentries-incubator.github.io/bioc-rnaseq
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Updates following the EuroBioC workshop #93

Closed csoneson closed 11 months ago

github-actions[bot] commented 11 months ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/carpentries-incubator/bioc-rnaseq/compare/md-outputs..md-outputs-PR-93

The following changes were observed in the rendered markdown documents:

 01-intro-to-rnaseq.md                             |   6 ++---
 02-setup.md                                       |   2 +-
 03-import-annotate.md                             |   4 +--
 04-exploratory-qc.md                              |  30 +++++++++++-----------
 fig/04-exploratory-qc-rendered-pca-exercise-1.png | Bin 14926 -> 14903 bytes
 md5sum.txt                                        |  10 ++++----
 setup.md                                          |   5 ++--
 7 files changed, 29 insertions(+), 28 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2023-10-07 08:01:08 +0000