recording memory requirements & docker containers needed

[mr-c]

as reported by cwltool and then confirmed with --strict-memory-limit

memory:

• setup, indexing: 7200MiB (single-core)
• 02-shell: ?
• 03-dependencies:
  • job quality_control_forward: Max memory used: 186MiB
  • job trim_low_quality_bases: Max memory used: 19MiB
  • job mapping_reads: Max memory used: 4759MiB (4.7 GiB)
  • job index_alignment: Max memory used: 0MiB ??
  • 05-reusing: job count_reads: Max memory used: 32MiB

containers:

docker pull quay.io/biocontainers/star:2.7.5c--0
docker pull biowardrobe2/fastqc:v0.11.5
docker pull quay.io/biocontainers/cutadapt:3.7--py39hbf8eff0_1
docker pull quay.io/biocontainers/samtools:1.14--hb421002_0
docker pull quay.io/biocontainers/subread:1.5.0p3--0