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carpentries-incubator / cwl-novice-tutorial

Introduction to Workflows with Common Workflow Language
https://carpentries-incubator.github.io/cwl-novice-tutorial/
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convert: start exercises #23

Open mr-c opened 3 years ago

mr-c commented 3 years ago

Co-authored-by: Renato Alves alves.rjc@gmail.com Co-authored-by: Bianca-Pasat bpasat@e-nios.com Co-authored-by: Celia van Gelder celia.van.gelder@dtls.nl

  1. Finding existing tool descriptions
  2. Refactoring the hardcoded values in the script
  3. Identifying the overall inputs and outputs
  4. Identifying dependencies between the steps
  5. Knowing what parts to skip (cleanup steps) that will be handled by the workflow engine
Instructions Thanks for contributing! :heart: Keep in mind that **lesson maintainers are volunteers** and it may take them some time to respond to your contribution. Although not all contributions can be incorporated into the lesson materials, we appreciate your time and effort to improve the curriculum. If you have any questions about the lesson maintenance process or would like to volunteer your time as a contribution reviewer, please contact the CWL Team via https://www.commonwl.org/#Support. You may delete these instructions from your comment.
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ALuesink commented 2 years ago

PR can be closed: commits are outdated