1) It is not well explained that first, you do the analysis with 5 genomes and then with 6. It should be better explained or do everything with the six genomes from the beginning.
2) The Step 4 figures show 6 genomes instead of 5. Decide how to improve this according to the issue 1). Also in the code you only generate the second figure. Something is wrong there.
3) more explanation needed about opening the tree in Microreact.
Czirion
commented
1 year ago
1) It is not well explained that first, you do the analysis with 5 genomes and then with 6. It should be better explained or do everything with the six genomes from the beginning. 2) The Step 4 figures show 6 genomes instead of 5. Decide how to improve this according to the issue 1). Also in the code you only generate the second figure. Something is wrong there. 3) more explanation needed about opening the tree in Microreact.