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carpentries-incubator / workflows-nextflow

Workflow management with Nextflow and nf-core
https://carpentries-incubator.github.io/workflows-nextflow/
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Pythoncode #145

Closed ggrimes closed 7 months ago

ggrimes commented 7 months ago

update episode 4 to include only python example and add associated nextflow and python script to files directory

github-actions[bot] commented 7 months ago

Thank you!

Thank you for your pull request :smiley:

:robot: This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

Rendered Changes

:mag: Inspect the changes: https://github.com/carpentries-incubator/workflows-nextflow/compare/md-outputs..md-outputs-PR-145

The following changes were observed in the rendered markdown documents:

 04-processes-part1.md                              | 69 +++++++++++++++-------
 .../scripts/process/process_python_script.nf (new) | 14 +++++
 files/scripts/process/process_reads.py (new)       | 17 ++++++
 md5sum.txt                                         |  2 +-
 4 files changed, 79 insertions(+), 23 deletions(-)
What does this mean? If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible. This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

:stopwatch: Updated at 2024-04-25 14:11:20 +0000