carrineblank / MicrO

A Microbial Ontology of Phenotypic and Metabolic Characters, Assays, and Culture Media Found in Prokaryotic Taxonomic Descriptions
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Update deprecated ENVO terms. #30

Open cmrn-rhi opened 2 years ago

cmrn-rhi commented 2 years ago

MicrO needs to do a refresh of its ENVO imports as it is currently listing outdated/deprecated ENVO terms on services like OLS as if they are not deprecated. This is not limited to the example term below, as most if not all of this "food product" branch was deprecated in ENVO for FOODON terms >= 4 years ago. This can create confusion for users looking up terms to tag their metadata.

MicrO version of "pork chop" [ENVO_00003079] via OLS look-up

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ENVO version of "pork chop" [ENVO_00003079] via Ontobee look-up

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