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casbap / ncRNA

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Issue with HumanDataPrep histogram #16

Closed markziemann closed 2 years ago

markziemann commented 2 years ago

https://github.com/casbap/ncRNA/blob/3ea177d094b93c7581dc69ef008d8afa64cfc585/HumanDataPrep.Rmd#L235

png("Data/hist_correlation1.png", width = 5300, height = 5300, res = 300, pointsize = 8) hist(correlate_melt, breaks = 20, xlab = "Gene Correlation Values",

  • main = "Spearman Correlation of RNASeq Counts") Error in hist.default(correlate_melt, breaks = 20, xlab = "Gene Correlation Values", : 'x' must be numeric dev.off() null device 1 head(correlate_melt,) Var1 Var2 value 2 ENSG00000227232 ENSG00000223972 0.8777559 3 ENSG00000278267 ENSG00000223972 0.9981221 4 ENSG00000243485 ENSG00000223972 0.9999483 5 ENSG00000237613 ENSG00000223972 0.9998932 6 ENSG00000240361 ENSG00000223972 0.9999499 7 ENSG00000186092 ENSG00000223972 0.9999499