Data does not exist when calling data(pfmix)

cascobayesian / pfmix

R code for visualizing and inferring the structure of Plasmodium falciparum mixture

2 stars 1 forks source link

Data does not exist when calling data(pfmix) #2

Open xgao32 opened 6 years ago

mstagliamonte commented 6 years ago

Hi, I am having the same problem; after installing the library:

install.packages('./PfMix/pfmix_1.0.tar.gz', repos = NULL, type = 'source') library(pfmix) library(abind)

But I cannot find the 'pf_data' anywhere. Can you please help us with finding the test data?

Thank you for your kind attention, Max

Small-Samori commented 2 years ago

Hello, I am also facing the same problem as mstagliamonte. Aside the sample data, can I use another dataset? I have a vcf file for which I want to visualize the Plasmodium falciparum mixture. Please how do I go about reading my vcf file into the ref and non matrices.

Thanks for your time and response.