I have created a 1.25mm FA template we can use and added it to dataset/hcp/res/templates/
Also, we can now choose between an inclusive white matter mask (e.g., FMRIB58_FA-mask_125mm_edit.nii.gz) and one restricted to the FA skeleton (e.g., FMRIB58_FA-skeleton_125mm.nii.gz).
The default in dataset/hcp/scripts/process/conf/args.ini is now set to the inclusive white matter mask:
I have created a 1.25mm FA template we can use and added it to
dataset/hcp/res/templates/
Also, we can now choose between an inclusive white matter mask (e.g.,FMRIB58_FA-mask_125mm_edit.nii.gz
) and one restricted to the FA skeleton (e.g.,FMRIB58_FA-skeleton_125mm.nii.gz
). The default indataset/hcp/scripts/process/conf/args.ini
is now set to the inclusive white matter mask:Do we do need to add this to
experiments/hcp/conf/args.ini
as well??