Week 5 Feedback

[schidambaran]

Bash script that performs read alignment and variant calling/filtering/annotation

3/3

Exercise	Points Possible	Grade
Read alignment	1	1
Variant calling	1	1
Filtering and annotation	1	1

VCF file containing the first 100 lines of your filtered/annotated VCF from Step 2.4

1/1

Python script that runs exploratory analysis of VCF from Step 2.4

4/4

Exercise	Points Possible	Grade
Code to parse VCF file	2	2
Code to produce multi-panel plot	2	2

Nicely formatted and labeled multi-panel plot showing summaries of exploratory analysis

1.5/2

Total: 9.5/10

Great work! For full credit:

• Step 3.4: The bar plot for predicted effects is empty.