Embargo 2024 Conversion (Cai lab)

TO-DO:

[x] Schedule initial meeting to ask for external resources and general info on experimental sessions
[x] Add conversion notes #2
[ ] Add TTL pulse for synch? --> not in the scope of work but mentioned in the kick-off notes
[ ] Add Miniscope support for this conversion (#8)
[ ] Add preprocessed imaging data (Minian)
[ ] Add segmentation (Minian) calcium events (Minian) #7 https://github.com/catalystneuro/roiextractors/pull/368 https://github.com/catalystneuro/neuroconv/pull/1107
[ ] Add cross sessions cell registration (CellReg)
[x] Add EMG signals (.edf) #3
[x] Add EEG signals (.edf) #3
[ ] Add EEG-related events, e.g, sleeping phase (.csv) #6
[ ] Add behavioral events: freezing behavior (EZTrack) #4
[ ] Write a conversion script for a condition day (Neutral or Aversion)
[ ] Write a conversion script for an online day.
[ ] Double check synchronization of the data streams.
[ ] Add subject/session metadata
[ ] Run validation over both condition and offline days using nwbinspector
[ ] Modify the documentation in the readme so it releases the latest working version and file structure.
[ ] Release the package so we can share with Cai lab for their own conversion.
[ ] Create demos notebook (not sure if we should have this, @alessandratrapani ?)
[ ] Schedule final meeting

catalystneuro / cai-lab-to-nwb