Add processed fiber photometry

catalystneuro / dombeck-lab-to-nwb

NWB Conversion project for the Dombeck lab at Northwestern University.

MIT License

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Closed weiglszonja closed 5 months ago

weiglszonja commented 6 months ago

Add data from processed fiber photometry

TODO:

[x] Add raw fiber photometry series to acquisition
[x] Add processed data to ophys
[x] Figure out single vs multi experiment type (do not write second fiber metadata for single fiber experiment)
[x] Add velocity and acceleration (continuous)
[x] Add reward events
[x] Add movement events (movement onset, acceleration and deceleration onset)
[x] Add peak transient events (the onset of large transient peaks for green or red fiber fluorescence)

weiglszonja commented 5 months ago

Example session here

weiglszonja commented 5 months ago

Thanks, I'll add a follow up PR to switch to ndx-fiber-photometry soon.