issues
search
catalystneuro
/
nwb-conversion-tools
Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
https://nwb-conversion-tools.readthedocs.io/en/main/
BSD 3-Clause "New" or "Revised" License
25
stars
12
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
added debugged Dockerfile
#553
CodyCBakerPhD
opened
2 years ago
1
[pre-commit.ci] pre-commit autoupdate
#551
pre-commit-ci[bot]
closed
2 years ago
0
YAML conversion specification CLI
#550
CodyCBakerPhD
closed
2 years ago
9
Further ophys metadata fixes
#549
h-mayorquin
closed
2 years ago
1
Added stubbing for write imaging
#548
h-mayorquin
closed
2 years ago
1
Correct order of writing in `add_two_photon_series`
#547
h-mayorquin
closed
2 years ago
5
Unit test `add_two_photon_series` in the `roiextractors.py` module
#546
h-mayorquin
closed
2 years ago
1
[Bug] source data validation fails when using new numpy typing
#544
h-mayorquin
closed
2 years ago
2
Unit test `roiextractors.py` module `add device`
#543
h-mayorquin
closed
2 years ago
2
[Refactoring/Enhancement] Pad buffering in GenericDataChunkIterator
#542
CodyCBakerPhD
closed
2 years ago
6
Added check to avoid adding roi response series with only 0 values
#541
h-mayorquin
closed
2 years ago
1
Refactor of add_two_photon_series II
#540
h-mayorquin
closed
2 years ago
1
`Device` and `ImagingPlane` should not be top properties of the `Ophys` schema.
#539
h-mayorquin
closed
2 years ago
10
Fix metadata combination of imaging and segmentation interfaces
#538
h-mayorquin
closed
2 years ago
2
[Bug] metadata of segmentation extractor and imaging extractor interfaces are incompatible
#537
h-mayorquin
closed
2 years ago
2
Refactor of `add_two_photon_series`
#536
h-mayorquin
closed
2 years ago
5
Update default parameters for ophys
#535
h-mayorquin
closed
2 years ago
8
Fix order of TwoPhotonSeries metadata update
#534
weiglszonja
closed
2 years ago
2
Add scanimage
#533
bendichter
closed
2 years ago
2
Small refactor of `test_gin_behavior` to pin new CI error
#532
h-mayorquin
closed
2 years ago
6
Add `.yaml` to accepted yaml extensions in `load_dict_from_file` function
#531
h-mayorquin
closed
2 years ago
8
[Feature]: propagate roiextractor stubbing
#530
CodyCBakerPhD
closed
2 years ago
0
[CI] swap to pre commit bot instead of actions
#529
CodyCBakerPhD
closed
2 years ago
2
fixup for TestMovieInterface
#528
weiglszonja
closed
2 years ago
0
Add timestamps for MovieDataInterface
#527
weiglszonja
closed
2 years ago
3
[Refactor] standardize LFP conversion kwargs
#526
CodyCBakerPhD
closed
2 years ago
2
[Refactor] standardize sorting interface kwargs
#525
CodyCBakerPhD
closed
2 years ago
5
[Refactor] Standardize conversion kwargs ophys
#524
CodyCBakerPhD
closed
2 years ago
2
Remove incorrect statement about doc gallery
#523
h-mayorquin
closed
2 years ago
0
Small refactor of movie interface
#522
h-mayorquin
closed
2 years ago
1
Refactor test movie interface for CI bug
#521
h-mayorquin
closed
2 years ago
0
[Bug] remove default session_start_time
#520
CodyCBakerPhD
closed
2 years ago
0
[Refactor] automated dandi upload improvements
#519
CodyCBakerPhD
closed
2 years ago
1
[Feature]: create RoiextractorsDataChunkIterator
#518
CodyCBakerPhD
closed
2 years ago
2
change name. The name of the sortware is "kilosort" not "kilo"
#517
bendichter
closed
2 years ago
1
[Refactor] run/write kwargs standardization
#516
CodyCBakerPhD
closed
2 years ago
6
[Not for merging] restore `test_gin_behavior` for CI bug catching
#515
h-mayorquin
closed
2 years ago
1
[Bug] Trying to fix datalad for new cache
#514
CodyCBakerPhD
closed
2 years ago
0
[Bug] Only run DANDI test if key is present
#513
CodyCBakerPhD
closed
2 years ago
1
[Feature] context helper for appending/making NWBFiles
#512
CodyCBakerPhD
closed
2 years ago
7
Metadata to handle `datetime` objects.
#510
h-mayorquin
closed
2 years ago
5
Metadata to handle `datetime` objects simple
#509
h-mayorquin
closed
2 years ago
1
[Feature]: TIFF interface should take a list of files
#508
CodyCBakerPhD
opened
2 years ago
4
[Feature]: read metadata for intan
#507
bendichter
closed
1 year ago
6
Allow sorting interface to run_conversion without a nwbfile II
#506
h-mayorquin
closed
2 years ago
0
Allow sorting interface to `run_conversion` without a nwbfile
#505
h-mayorquin
closed
2 years ago
2
Drop nwb inspector dependency
#504
h-mayorquin
closed
2 years ago
1
Allow `BlackrockRecordingExtractorInterface` to do `run_conversion` with no nwbfile
#503
h-mayorquin
closed
2 years ago
1
Icephys restore2
#502
bendichter
closed
2 years ago
4
Bug in the movie data interface only appearing on CI
#499
h-mayorquin
closed
2 years ago
2
Previous
Next