catalystneuro / roiextractors

Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.
https://roiextractors.readthedocs.io/en/latest/index.html
BSD 3-Clause "New" or "Revised" License
12 stars 7 forks source link

VolumetricImagingExtractor #248

Closed pauladkisson closed 1 year ago

pauladkisson commented 1 year ago

Fixes #245

See also discussion in #241

CodyCBakerPhD commented 1 year ago

I will recruit @alessandratrapani to help review this PR as well - maybe we'll go over it at the retreat?

codecov[bot] commented 1 year ago

Codecov Report

Merging #248 (60e89ca) into main (e8d84bc) will increase coverage by 0.56%. Report is 1 commits behind head on main. The diff coverage is 100.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##             main     #248      +/-   ##
==========================================
+ Coverage   76.98%   77.55%   +0.56%     
==========================================
  Files          37       38       +1     
  Lines        2724     2793      +69     
==========================================
+ Hits         2097     2166      +69     
  Misses        627      627              
Flag Coverage Δ
unittests 77.55% <100.00%> (+0.56%) :arrow_up:

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Coverage Δ
src/roiextractors/extractorlist.py 100.00% <100.00%> (ø)
src/roiextractors/testing.py 99.31% <100.00%> (+<0.01%) :arrow_up:
src/roiextractors/volumetricimagingextractor.py 100.00% <100.00%> (ø)