catalystneuro / roiextractors

Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by SpikeInterface.
https://roiextractors.readthedocs.io/en/latest/index.html
BSD 3-Clause "New" or "Revised" License
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[Feature]: Support for ScanImage recording over multiple .tif files #258

Closed alessandratrapani closed 1 year ago

alessandratrapani commented 1 year ago

What would you like to see added to ROI Extractors?

I am working with a ScanImage dataset where a single session recording is chunked over time in multiple .tif files. Currently, the ScanImage extractor extracts the entire video from one .tif file. I need to pass a folder_path where all the .tif files of one session are stored and concatenate each video over time.

Do you have any interest in helping implement the feature?

Yes.

Code of Conduct

alessandratrapani commented 1 year ago

It will be implemented for the conversion project: https://github.com/catalystneuro/mousev1-to-nwb/pull/4