Lack of information regarding optical channel of 2P microscope

catalystneuro / visual-coding-to-nwb-v2

Conversion of old v1 NWB files from https://registry.opendata.aws/allen-brain-observatory/ to v2 so they can be uploaded to DANDI.

MIT License

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Lack of information regarding optical channel of 2P microscope #15

Closed CodyCBakerPhD closed 8 months ago

CodyCBakerPhD commented 11 months ago

The white paper at http://help.brain-map.org/display/observatory/Documentation does a good job explaining the emission collection for the tomography data, but not for the 2P imaging, which focuses more on the protocol for choosing the field of view

As such I don't have emission wavelength or other useful information to associate with the OpticalChannel of the ImagingPlane

CodyCBakerPhD commented 8 months ago

Unable to find specific information in any of the white papers. Lots about the retinotopic stuff but not much on the actual 2P fluorescence