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cavalab / brush

An interpretable machine learning library
http://cavalab.org/brush/
GNU General Public License v3.0
2 stars 0 forks source link

specify dependencies #9

Closed lacava closed 2 years ago

lacava commented 2 years ago
lacava commented 2 years ago

conda list: 

# packages in environment at /home/bill/anaconda3/envs/brush:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       2_gnu    conda-forge
alabaster                 0.7.12                     py_0    conda-forge
alsa-lib                  1.2.6.1              h7f98852_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py310h5764c6d_2    conda-forge
asttokens                 2.0.5              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.36.0               h3371d22_4    conda-forge
attr                      2.5.1                h166bdaf_0    conda-forge
attrs                     21.4.0             pyhd8ed1ab_0    conda-forge
babel                     2.10.3             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.11.1             pyha770c72_0    conda-forge
bleach                    5.0.1              pyhd8ed1ab_0    conda-forge
breathe                   4.34.0             pyhd8ed1ab_0    conda-forge
brotlipy                  0.7.0           py310h5764c6d_1004    conda-forge
brushgp                   0.0.1                    pypi_0    pypi
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
ca-certificates           2022.6.15            ha878542_0    conda-forge
cairo                     1.16.0            ha61ee94_1011    conda-forge
certifi                   2022.6.15       py310hff52083_0    conda-forge
cffi                      1.15.1          py310h255011f_0    conda-forge
charset-normalizer        2.1.0              pyhd8ed1ab_0    conda-forge
cmake                     3.23.2               h5432695_0    conda-forge
colorama                  0.4.5              pyhd8ed1ab_0    conda-forge
cryptography              37.0.4          py310h597c629_0    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.6.0           py310hd8f1fbe_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
docutils                  0.18.1          py310hff52083_1    conda-forge
eigen                     3.4.0                h4bd325d_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
executing                 0.9.1              pyhd8ed1ab_0    conda-forge
expat                     2.4.8                h27087fc_0    conda-forge
fftw                      3.3.10          nompi_h77c792f_102    conda-forge
flit-core                 3.7.1              pyhd8ed1ab_0    conda-forge
fmt                       9.0.0                h924138e_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.0               h8e229c2_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
freetype                  2.10.4               h0708190_1    conda-forge
fribidi                   1.0.10               h36c2ea0_0    conda-forge
gdk-pixbuf                2.42.8               hff1cb4f_0    conda-forge
gettext                   0.19.8.1          h73d1719_1008    conda-forge
giflib                    5.2.1                h36c2ea0_2    conda-forge
glib                      2.72.1               h6239696_0    conda-forge
glib-tools                2.72.1               h6239696_0    conda-forge
graphite2                 1.3.13            h58526e2_1001    conda-forge
graphviz                  5.0.0                h5abf519_0    conda-forge
gst-plugins-base          1.20.3               hf6a322e_0    conda-forge
gstreamer                 1.20.3               hd4edc92_0    conda-forge
gtest                     1.11.0               h924138e_0    conda-forge
gtk2                      2.24.33              h90689f9_2    conda-forge
gts                       0.7.6                h64030ff_2    conda-forge
harfbuzz                  4.4.1                hf9f4e7c_0    conda-forge
icu                       70.1                 h27087fc_0    conda-forge
idna                      3.3                pyhd8ed1ab_0    conda-forge
imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
importlib-metadata        4.11.4          py310hff52083_0    conda-forge
importlib_resources       5.9.0              pyhd8ed1ab_0    conda-forge
iniconfig                 1.1.1              pyh9f0ad1d_0    conda-forge
ipykernel                 6.15.1             pyh210e3f2_0    conda-forge
ipython                   8.4.0           py310hff52083_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                7.7.1              pyhd8ed1ab_0    conda-forge
jack                      1.9.18            h8c3723f_1002    conda-forge
jedi                      0.18.1          py310hff52083_1    conda-forge
jinja2                    3.1.2              pyhd8ed1ab_1    conda-forge
jpeg                      9e                   h166bdaf_2    conda-forge
jsonschema                4.7.2              pyhd8ed1ab_0    conda-forge
jupyter                   1.0.0           py310hff52083_7    conda-forge
jupyter_client            7.3.4              pyhd8ed1ab_0    conda-forge
jupyter_console           6.4.4              pyhd8ed1ab_0    conda-forge
jupyter_core              4.11.1          py310hff52083_0    conda-forge
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        1.1.1              pyhd8ed1ab_0    conda-forge
keyutils                  1.6.1                h166bdaf_0    conda-forge
krb5                      1.19.3               h3790be6_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
lerc                      3.0                  h9c3ff4c_0    conda-forge
libcap                    2.64                 ha37c62d_0    conda-forge
libclang                  14.0.6          default_h2e3cab8_0    conda-forge
libclang13                14.0.6          default_h3a83d3e_0    conda-forge
libcups                   2.3.3                hf5a7f15_1    conda-forge
libcurl                   7.83.1               h7bff187_0    conda-forge
libdb                     6.2.32               h9c3ff4c_0    conda-forge
libdeflate                1.12                 h166bdaf_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.10               h9b69904_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libflac                   1.3.4                h27087fc_0    conda-forge
libgcc-ng                 12.1.0              h8d9b700_16    conda-forge
libgd                     2.3.3                h18fbbfe_3    conda-forge
libgfortran-ng            12.1.0              h69a702a_16    conda-forge
libgfortran5              12.1.0              hdcd56e2_16    conda-forge
libglib                   2.72.1               h2d90d5f_0    conda-forge
libgomp                   12.1.0              h8d9b700_16    conda-forge
libiconv                  1.16                 h516909a_0    conda-forge
libllvm14                 14.0.6               he0ac6c6_0    conda-forge
libnghttp2                1.47.0               h727a467_0    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.37               h753d276_3    conda-forge
libpq                     14.4                 hd77ab85_0    conda-forge
librsvg                   2.54.4               h7abd40a_0    conda-forge
libsndfile                1.0.31               h9c3ff4c_1    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libssh2                   1.10.0               ha56f1ee_2    conda-forge
libstdcxx-ng              12.1.0              ha89aaad_16    conda-forge
libtiff                   4.4.0                hc85c160_1    conda-forge
libtool                   2.4.6             h9c3ff4c_1008    conda-forge
libudev1                  249                  h166bdaf_4    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libuv                     1.44.2               h166bdaf_0    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.2.3                h522a892_0    conda-forge
libwebp-base              1.2.3                h166bdaf_1    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.14               h22db469_3    conda-forge
libzlib                   1.2.12               h166bdaf_2    conda-forge
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
maisie-sphinx-theme       0.1.2                    pypi_0    pypi
markupsafe                2.1.1           py310h5764c6d_1    conda-forge
matplotlib-inline         0.1.3              pyhd8ed1ab_0    conda-forge
mistune                   0.8.4           py310h6acc77f_1005    conda-forge
mysql-common              8.0.29               haf5c9bc_1    conda-forge
mysql-libs                8.0.29               h28c427c_1    conda-forge
nbclient                  0.6.6              pyhd8ed1ab_0    conda-forge
nbconvert                 6.5.0              pyhd8ed1ab_0    conda-forge
nbconvert-core            6.5.0              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          6.5.0              pyhd8ed1ab_0    conda-forge
nbformat                  5.4.0              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h27087fc_1    conda-forge
nest-asyncio              1.5.5              pyhd8ed1ab_0    conda-forge
ninja                     1.11.0               h924138e_0    conda-forge
notebook                  6.4.12             pyha770c72_0    conda-forge
nspr                      4.32                 h9c3ff4c_1    conda-forge
nss                       3.78                 h2350873_0    conda-forge
numpy                     1.23.1                   pypi_0    pypi
openssl                   1.1.1q               h166bdaf_0    conda-forge
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pandas                    1.4.3                    pypi_0    pypi
pandoc                    2.18                 ha770c72_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
pango                     1.50.8               hbd2fdc8_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pip                       22.2               pyhd8ed1ab_0    conda-forge
pixman                    0.40.0               h36c2ea0_0    conda-forge
pluggy                    1.0.0           py310hff52083_3    conda-forge
ply                       3.11                       py_1    conda-forge
pmlb                      1.0.1.post3              pypi_0    pypi
portaudio                 19.6.0               h57a0ea0_5    conda-forge
prometheus_client         0.14.1             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.30             pyha770c72_0    conda-forge
prompt_toolkit            3.0.30               hd8ed1ab_0    conda-forge
psutil                    5.9.1           py310h5764c6d_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pulseaudio                14.0                 h7f54b18_8    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
py                        1.11.0             pyh6c4a22f_0    conda-forge
pybind11                  2.10.0          py310hbf28c38_0    conda-forge
pybind11-global           2.10.0          py310hbf28c38_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pydot                     1.4.2           py310hff52083_2    conda-forge
pygments                  2.12.0             pyhd8ed1ab_0    conda-forge
pyopenssl                 22.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyqt                      5.15.7          py310h29803b5_0    conda-forge
pyqt5-sip                 12.11.0         py310hd8f1fbe_0    conda-forge
pyrsistent                0.18.1          py310h5764c6d_1    conda-forge
pysocks                   1.7.1           py310hff52083_5    conda-forge
pytest                    7.1.2           py310hff52083_0    conda-forge
python                    3.10.5          h582c2e5_0_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.1             pyhd8ed1ab_0    conda-forge
python-graphviz           0.20.1                   pypi_0    pypi
python_abi                3.10                    2_cp310    conda-forge
pytz                      2022.1             pyhd8ed1ab_0    conda-forge
pyyaml                    6.0                      pypi_0    pypi
pyzmq                     23.2.0          py310h330234f_0    conda-forge
qt-main                   5.15.4               ha5833f6_2    conda-forge
qtconsole                 5.3.1              pyhd8ed1ab_0    conda-forge
qtconsole-base            5.3.1              pyha770c72_0    conda-forge
qtpy                      2.1.0              pyhd8ed1ab_0    conda-forge
readline                  8.1.2                h0f457ee_0    conda-forge
requests                  2.28.1             pyhd8ed1ab_0    conda-forge
rhash                     1.4.3                h166bdaf_0    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                63.2.0          py310hff52083_0    conda-forge
sip                       6.6.2           py310hd8f1fbe_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sphinx                    5.1.1              pyh6c4a22f_0    conda-forge
sphinxcontrib-applehelp   1.0.2                      py_0    conda-forge
sphinxcontrib-devhelp     1.0.2                      py_0    conda-forge
sphinxcontrib-htmlhelp    2.0.0              pyhd8ed1ab_0    conda-forge
sphinxcontrib-jsmath      1.0.1                      py_0    conda-forge
sphinxcontrib-qthelp      1.0.3                      py_0    conda-forge
sphinxcontrib-serializinghtml 1.1.5              pyhd8ed1ab_2    conda-forge
sqlite                    3.39.1               h4ff8645_0    conda-forge
stack_data                0.3.0              pyhd8ed1ab_0    conda-forge
terminado                 0.15.0          py310hff52083_0    conda-forge
tinycss2                  1.1.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
toml                      0.10.2             pyhd8ed1ab_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tornado                   6.2             py310h5764c6d_0    conda-forge
traitlets                 5.3.0              pyhd8ed1ab_0    conda-forge
tzdata                    2022a                h191b570_0    conda-forge
urllib3                   1.26.10            pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
widgetsnbextension        3.6.1              pyha770c72_0    conda-forge
xcb-util                  0.4.0                h166bdaf_0    conda-forge
xcb-util-image            0.4.0                h166bdaf_0    conda-forge
xcb-util-keysyms          0.4.0                h166bdaf_0    conda-forge
xcb-util-renderutil       0.3.9                h166bdaf_0    conda-forge
xcb-util-wm               0.4.1                h166bdaf_0    conda-forge
xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
xorg-libice               1.0.10               h7f98852_0    conda-forge
xorg-libsm                1.2.3             hd9c2040_1000    conda-forge
xorg-libx11               1.7.2                h7f98852_0    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xorg-libxext              1.3.4                h7f98852_1    conda-forge
xorg-libxrender           0.9.10            h7f98852_1003    conda-forge
xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
xorg-xextproto            7.3.0             h7f98852_1002    conda-forge
xorg-xproto               7.0.31            h7f98852_1007    conda-forge
xz                        5.2.5                h516909a_1    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zipp                      3.8.0              pyhd8ed1ab_0    conda-forge
zlib                      1.2.12               h166bdaf_2    conda-forge
zstd                      1.5.2                h8a70e8d_2    conda-forge

conda env export:

name: brush
channels:
  - conda-forge
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - alabaster=0.7.12=py_0
  - alsa-lib=1.2.6.1=h7f98852_0
  - argon2-cffi=21.3.0=pyhd8ed1ab_0
  - argon2-cffi-bindings=21.2.0=py310h5764c6d_2
  - asttokens=2.0.5=pyhd8ed1ab_0
  - atk-1.0=2.36.0=h3371d22_4
  - attr=2.5.1=h166bdaf_0
  - attrs=21.4.0=pyhd8ed1ab_0
  - babel=2.10.3=pyhd8ed1ab_0
  - backcall=0.2.0=pyh9f0ad1d_0
  - backports=1.0=py_2
  - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
  - beautifulsoup4=4.11.1=pyha770c72_0
  - bleach=5.0.1=pyhd8ed1ab_0
  - breathe=4.34.0=pyhd8ed1ab_0
  - brotlipy=0.7.0=py310h5764c6d_1004
  - bzip2=1.0.8=h7f98852_4
  - c-ares=1.18.1=h7f98852_0
  - ca-certificates=2022.6.15=ha878542_0
  - cairo=1.16.0=ha61ee94_1011
  - certifi=2022.6.15=py310hff52083_0
  - cffi=1.15.1=py310h255011f_0
  - charset-normalizer=2.1.0=pyhd8ed1ab_0
  - cmake=3.23.2=h5432695_0
  - colorama=0.4.5=pyhd8ed1ab_0
  - cryptography=37.0.4=py310h597c629_0
  - dbus=1.13.6=h5008d03_3
  - debugpy=1.6.0=py310hd8f1fbe_0
  - decorator=5.1.1=pyhd8ed1ab_0
  - defusedxml=0.7.1=pyhd8ed1ab_0
  - docutils=0.18.1=py310hff52083_1
  - eigen=3.4.0=h4bd325d_0
  - entrypoints=0.4=pyhd8ed1ab_0
  - executing=0.9.1=pyhd8ed1ab_0
  - expat=2.4.8=h27087fc_0
  - fftw=3.3.10=nompi_h77c792f_102
  - flit-core=3.7.1=pyhd8ed1ab_0
  - fmt=9.0.0=h924138e_0
  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
  - font-ttf-inconsolata=3.000=h77eed37_0
  - font-ttf-source-code-pro=2.038=h77eed37_0
  - font-ttf-ubuntu=0.83=hab24e00_0
  - fontconfig=2.14.0=h8e229c2_0
  - fonts-conda-ecosystem=1=0
  - fonts-conda-forge=1=0
  - freetype=2.10.4=h0708190_1
  - fribidi=1.0.10=h36c2ea0_0
  - gdk-pixbuf=2.42.8=hff1cb4f_0
  - gettext=0.19.8.1=h73d1719_1008
  - giflib=5.2.1=h36c2ea0_2
  - glib=2.72.1=h6239696_0
  - glib-tools=2.72.1=h6239696_0
  - graphite2=1.3.13=h58526e2_1001
  - graphviz=5.0.0=h5abf519_0
  - gst-plugins-base=1.20.3=hf6a322e_0
  - gstreamer=1.20.3=hd4edc92_0
  - gtest=1.11.0=h924138e_0
  - gtk2=2.24.33=h90689f9_2
  - gts=0.7.6=h64030ff_2
  - harfbuzz=4.4.1=hf9f4e7c_0
  - icu=70.1=h27087fc_0
  - idna=3.3=pyhd8ed1ab_0
  - imagesize=1.4.1=pyhd8ed1ab_0
  - importlib-metadata=4.11.4=py310hff52083_0
  - importlib_resources=5.9.0=pyhd8ed1ab_0
  - iniconfig=1.1.1=pyh9f0ad1d_0
  - ipykernel=6.15.1=pyh210e3f2_0
  - ipython=8.4.0=py310hff52083_0
  - ipython_genutils=0.2.0=py_1
  - ipywidgets=7.7.1=pyhd8ed1ab_0
  - jack=1.9.18=h8c3723f_1002
  - jedi=0.18.1=py310hff52083_1
  - jinja2=3.1.2=pyhd8ed1ab_1
  - jpeg=9e=h166bdaf_2
  - jsonschema=4.7.2=pyhd8ed1ab_0
  - jupyter=1.0.0=py310hff52083_7
  - jupyter_client=7.3.4=pyhd8ed1ab_0
  - jupyter_console=6.4.4=pyhd8ed1ab_0
  - jupyter_core=4.11.1=py310hff52083_0
  - jupyterlab_pygments=0.2.2=pyhd8ed1ab_0
  - jupyterlab_widgets=1.1.1=pyhd8ed1ab_0
  - keyutils=1.6.1=h166bdaf_0
  - krb5=1.19.3=h3790be6_0
  - ld_impl_linux-64=2.36.1=hea4e1c9_2
  - lerc=3.0=h9c3ff4c_0
  - libcap=2.64=ha37c62d_0
  - libclang=14.0.6=default_h2e3cab8_0
  - libclang13=14.0.6=default_h3a83d3e_0
  - libcups=2.3.3=hf5a7f15_1
  - libcurl=7.83.1=h7bff187_0
  - libdb=6.2.32=h9c3ff4c_0
  - libdeflate=1.12=h166bdaf_0
  - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=h516909a_1
  - libevent=2.1.10=h9b69904_4
  - libffi=3.4.2=h7f98852_5
  - libflac=1.3.4=h27087fc_0
  - libgcc-ng=12.1.0=h8d9b700_16
  - libgd=2.3.3=h18fbbfe_3
  - libgfortran-ng=12.1.0=h69a702a_16
  - libgfortran5=12.1.0=hdcd56e2_16
  - libglib=2.72.1=h2d90d5f_0
  - libgomp=12.1.0=h8d9b700_16
  - libiconv=1.16=h516909a_0
  - libllvm14=14.0.6=he0ac6c6_0
  - libnghttp2=1.47.0=h727a467_0
  - libnsl=2.0.0=h7f98852_0
  - libogg=1.3.4=h7f98852_1
  - libopus=1.3.1=h7f98852_1
  - libpng=1.6.37=h753d276_3
  - libpq=14.4=hd77ab85_0
  - librsvg=2.54.4=h7abd40a_0
  - libsndfile=1.0.31=h9c3ff4c_1
  - libsodium=1.0.18=h36c2ea0_1
  - libssh2=1.10.0=ha56f1ee_2
  - libstdcxx-ng=12.1.0=ha89aaad_16
  - libtiff=4.4.0=hc85c160_1
  - libtool=2.4.6=h9c3ff4c_1008
  - libudev1=249=h166bdaf_4
  - libuuid=2.32.1=h7f98852_1000
  - libuv=1.44.2=h166bdaf_0
  - libvorbis=1.3.7=h9c3ff4c_0
  - libwebp=1.2.3=h522a892_0
  - libwebp-base=1.2.3=h166bdaf_1
  - libxcb=1.13=h7f98852_1004
  - libxkbcommon=1.0.3=he3ba5ed_0
  - libxml2=2.9.14=h22db469_3
  - libzlib=1.2.12=h166bdaf_2
  - lz4-c=1.9.3=h9c3ff4c_1
  - markupsafe=2.1.1=py310h5764c6d_1
  - matplotlib-inline=0.1.3=pyhd8ed1ab_0
  - mistune=0.8.4=py310h6acc77f_1005
  - mysql-common=8.0.29=haf5c9bc_1
  - mysql-libs=8.0.29=h28c427c_1
  - nbclient=0.6.6=pyhd8ed1ab_0
  - nbconvert=6.5.0=pyhd8ed1ab_0
  - nbconvert-core=6.5.0=pyhd8ed1ab_0
  - nbconvert-pandoc=6.5.0=pyhd8ed1ab_0
  - nbformat=5.4.0=pyhd8ed1ab_0
  - ncurses=6.3=h27087fc_1
  - nest-asyncio=1.5.5=pyhd8ed1ab_0
  - ninja=1.11.0=h924138e_0
  - notebook=6.4.12=pyha770c72_0
  - nspr=4.32=h9c3ff4c_1
  - nss=3.78=h2350873_0
  - openssl=1.1.1q=h166bdaf_0
  - packaging=21.3=pyhd8ed1ab_0
  - pandoc=2.18=ha770c72_0
  - pandocfilters=1.5.0=pyhd8ed1ab_0
  - pango=1.50.8=hbd2fdc8_0
  - parso=0.8.3=pyhd8ed1ab_0
  - pcre=8.45=h9c3ff4c_0
  - pexpect=4.8.0=pyh9f0ad1d_2
  - pickleshare=0.7.5=py_1003
  - pip=22.2=pyhd8ed1ab_0
  - pixman=0.40.0=h36c2ea0_0
  - pluggy=1.0.0=py310hff52083_3
  - ply=3.11=py_1
  - portaudio=19.6.0=h57a0ea0_5
  - prometheus_client=0.14.1=pyhd8ed1ab_0
  - prompt-toolkit=3.0.30=pyha770c72_0
  - prompt_toolkit=3.0.30=hd8ed1ab_0
  - psutil=5.9.1=py310h5764c6d_0
  - pthread-stubs=0.4=h36c2ea0_1001
  - ptyprocess=0.7.0=pyhd3deb0d_0
  - pulseaudio=14.0=h7f54b18_8
  - pure_eval=0.2.2=pyhd8ed1ab_0
  - py=1.11.0=pyh6c4a22f_0
  - pybind11=2.10.0=py310hbf28c38_0
  - pybind11-global=2.10.0=py310hbf28c38_0
  - pycparser=2.21=pyhd8ed1ab_0
  - pydot=1.4.2=py310hff52083_2
  - pygments=2.12.0=pyhd8ed1ab_0
  - pyopenssl=22.0.0=pyhd8ed1ab_0
  - pyparsing=3.0.9=pyhd8ed1ab_0
  - pyqt=5.15.7=py310h29803b5_0
  - pyqt5-sip=12.11.0=py310hd8f1fbe_0
  - pyrsistent=0.18.1=py310h5764c6d_1
  - pysocks=1.7.1=py310hff52083_5
  - pytest=7.1.2=py310hff52083_0
  - python=3.10.5=h582c2e5_0_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python-fastjsonschema=2.16.1=pyhd8ed1ab_0
  - python_abi=3.10=2_cp310
  - pytz=2022.1=pyhd8ed1ab_0
  - pyzmq=23.2.0=py310h330234f_0
  - qt-main=5.15.4=ha5833f6_2
  - qtconsole=5.3.1=pyhd8ed1ab_0
  - qtconsole-base=5.3.1=pyha770c72_0
  - qtpy=2.1.0=pyhd8ed1ab_0
  - readline=8.1.2=h0f457ee_0
  - requests=2.28.1=pyhd8ed1ab_0
  - rhash=1.4.3=h166bdaf_0
  - send2trash=1.8.0=pyhd8ed1ab_0
  - setuptools=63.2.0=py310hff52083_0
  - sip=6.6.2=py310hd8f1fbe_0
  - six=1.16.0=pyh6c4a22f_0
  - snowballstemmer=2.2.0=pyhd8ed1ab_0
  - soupsieve=2.3.2.post1=pyhd8ed1ab_0
  - sphinx=5.1.1=pyh6c4a22f_0
  - sphinxcontrib-applehelp=1.0.2=py_0
  - sphinxcontrib-devhelp=1.0.2=py_0
  - sphinxcontrib-htmlhelp=2.0.0=pyhd8ed1ab_0
  - sphinxcontrib-jsmath=1.0.1=py_0
  - sphinxcontrib-qthelp=1.0.3=py_0
  - sphinxcontrib-serializinghtml=1.1.5=pyhd8ed1ab_2
  - sqlite=3.39.1=h4ff8645_0
  - stack_data=0.3.0=pyhd8ed1ab_0
  - terminado=0.15.0=py310hff52083_0
  - tinycss2=1.1.1=pyhd8ed1ab_0
  - tk=8.6.12=h27826a3_0
  - toml=0.10.2=pyhd8ed1ab_0
  - tomli=2.0.1=pyhd8ed1ab_0
  - tornado=6.2=py310h5764c6d_0
  - traitlets=5.3.0=pyhd8ed1ab_0
  - tzdata=2022a=h191b570_0
  - urllib3=1.26.10=pyhd8ed1ab_0
  - wcwidth=0.2.5=pyh9f0ad1d_2
  - webencodings=0.5.1=py_1
  - wheel=0.37.1=pyhd8ed1ab_0
  - widgetsnbextension=3.6.1=pyha770c72_0
  - xcb-util=0.4.0=h166bdaf_0
  - xcb-util-image=0.4.0=h166bdaf_0
  - xcb-util-keysyms=0.4.0=h166bdaf_0
  - xcb-util-renderutil=0.3.9=h166bdaf_0
  - xcb-util-wm=0.4.1=h166bdaf_0
  - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.0.10=h7f98852_0
  - xorg-libsm=1.2.3=hd9c2040_1000
  - xorg-libx11=1.7.2=h7f98852_0
  - xorg-libxau=1.0.9=h7f98852_0
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h7f98852_1
  - xorg-libxrender=0.9.10=h7f98852_1003
  - xorg-renderproto=0.11.1=h7f98852_1002
  - xorg-xextproto=7.3.0=h7f98852_1002
  - xorg-xproto=7.0.31=h7f98852_1007
  - xz=5.2.5=h516909a_1
  - zeromq=4.3.4=h9c3ff4c_1
  - zipp=3.8.0=pyhd8ed1ab_0
  - zlib=1.2.12=h166bdaf_2
  - zstd=1.5.2=h8a70e8d_2
  - pip:
    - brushgp==0.0.1
    - maisie-sphinx-theme==0.1.2
    - numpy==1.23.1
    - pandas==1.4.3
    - pmlb==1.0.1.post3
    - python-graphviz==0.20.1
    - pyyaml==6.0
JDRomano2 commented 2 years ago

I've updated and tested a minimal set of dependencies in environment.yml that successfully configures and installs the C++ and Python code. One of the peculiarities with the conda-forge packages is a separation of GCC and G++. GCC is installed via the expected gcc, but G++ is in conda-forge as cxx. Fortunately, both are available in v12.x and install pretty quickly.

The main issue that would be worthwhile to spend some time on in the future is manually specifying good versions for other dependencies, which are currently just listed by name in environment.yml. Specifying versions should help to resolve the environment more quickly, and conda env create should work more quickly.

See 9c47a41 for details.