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cbg-ethz / ConsensusFixer

Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.
GNU General Public License v3.0
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Calling deletions #2

Closed SoapZA closed 10 years ago

SoapZA commented 10 years ago

Feature request: -d will not put an 'N' if gap fraction is >= pluralityN (effectively closing the gap in the reference)

armintoepfer commented 10 years ago

Will be added with 0.1.4