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cbg-ethz / ConsensusFixer

Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.
GNU General Public License v3.0
18 stars 3 forks source link

Adding dashes rather than bases from the reference for uncovered regions. Issue #6 #7

Closed nahmadsen closed 6 years ago

nahmadsen commented 6 years ago

Hi @armintoepfer,

I have implemented the feature that tolot27 requested in issue #6, as I needed the same feature too.

Looking forward to hearing if you can use it. Cheers

armintoepfer commented 6 years ago

Thank you. I've taken your changes and will add it with a version inc.

armintoepfer commented 6 years ago

Also added you here https://github.com/cbg-ethz/ConsensusFixer/commit/927ced77774d7d1858f4b076a21997f99e1b38a2

Thanks again!

nahmadsen commented 6 years ago

Thank you for the quick responce! Cheers Nina