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cbg-ethz / SCITE

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Merge or consensus tree #9

Closed nansari-pour closed 6 years ago

nansari-pour commented 6 years ago

Hi there,

When I get more than one tree, I am able to find the consensus by running 'consense' in PHYLIP on all .newick trees. However, I am not able to merge or find the consensus for .gv output. I have tried Graphviz (gvpack) but it doesn't seem to work.

Is there a way to merge the mutation trees in .gv format to get the consensus tree?

Also, what is the best tool to visualise the .gv trees?

Thanks

jahnka commented 6 years ago

I'm not aware of any consensus tree builder for Graphviz files, but agree it would be a useful function. For visualization I just use Graphviz (on Mac OS).