cbg-ethz / VILOCA

VILOCA: VIral LOcal haplotype reconstruction and mutation CAlling for short and long read data
GNU General Public License v3.0
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working multiprocessing #31

Closed LaraFuhrmann closed 10 months ago

LaraFuhrmann commented 1 year ago

Aim: Allow multiprocessing for the window building (b2w). This is especially interesting for ultra-high-coverage samples.

In master branch, the windows are build one-by-one through a for-loop.

LaraFuhrmann commented 10 months ago

I tested the branch on various benchmarking dataset, also comparing envp-mode to non-envp. Everything looks good in the results.