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cbg-ethz / haploclique

Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
GNU General Public License v3.0
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Delete bam-to-alignment-priors.cpp #17

Closed armintoepfer closed 7 years ago

armintoepfer commented 7 years ago

Do we still need bam-to-alignment-priors.cpp?

tobiasmarschall commented 7 years ago

AFAIK the answer is no, but that's a question for @collurio229.

brnrdlang commented 7 years ago

No, it should not be needed anymore. The new haploclique executable takes a bamfile directly as input.