Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
GNU General Public License v3.0
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Modularize edge criteria and allow for arbitrary combinations #22
In particular, make it possible to turn on/off the sequence criterion and the fragment size criterion independently. Potentially include the original edge criterion from the master branch for comparison purposes.
In particular, make it possible to turn on/off the sequence criterion and the fragment size criterion independently. Potentially include the original edge criterion from the master branch for comparison purposes.