git:// versus https:// in install-additional-software.sh

cbg-ethz / haploclique

Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.

GNU General Public License v3.0

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git:// versus https:// in install-additional-software.sh #24

Closed daveuu closed 7 years ago

daveuu commented 7 years ago

install-additional-software.sh hangs on cloning via git:// URLs but using https:// URLs instead works. Maybe because I'm behind a firewall proxy or maybe because of a change at github.com?

This is a fix:

sed -i -e "s/git:/https:/g" install-additional-software.sh

armintoepfer commented 7 years ago

Thanks for the notice, very soon, we'll release the latest version that automatizes the global reconstruction. No external tools needed anymore :) Have a look at the development branch