Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
edgeBetweenNonOverlappingAlignments: This test verifies if the algorithm considers an edge between two non_overlapping AlignmentRecords.
edgeBetweenOverlappingCrossPairsAlignments: This test verifies if the algorithm considers an edge between two partially overlapping AlignmentRecords. The second pair of the first read is aligned with the first pair of second read.
Adding two more tests for edgeBetween function.