cbg-ethz / haploclique

Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
GNU General Public License v3.0
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This is the 1st CL to add limit_clique_size option to Haploclique. #48

Closed MaryamZaheri closed 7 years ago

armintoepfer commented 7 years ago

If we limit the clique size, are we going to skew the frequency distribution of super-reads?