cbg-ethz / haploclique

Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
GNU General Public License v3.0
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modification to not allow any edge between reads with incompatible gap #56

Closed MaryamZaheri closed 6 years ago

MaryamZaheri commented 6 years ago

the finalized modification of the edgeBetween function (to not allow any edge between reads with incompatible gap)