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cbg-ethz / shorah

Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)
GNU General Public License v3.0
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dec.py - "UnboundLocalError: local variable 'prop' referenced before assignment" #2

Closed kentwait closed 10 years ago

kentwait commented 10 years ago

I am having problems running dec.py on defaults. I was using my own sorted bam data and reference sequence when I got this error:

Traceback (most recent call last):
  File "./shorah.py", line 142, in <module>
    keep_files=options.k, alpha=options.a)
  File "/Users/kent/src/shorah-2f3e635/dec.py", line 398, in main
    proposed[beg] = (get_prop(dbg_file), j)
  File "/Users/kent/src/shorah-2f3e635/dec.py", line 251, in get_prop
    return prop
UnboundLocalError: local variable 'prop' referenced before assignment
ozagordi commented 10 years ago

Oops! I'm only seeing this now. Any news?