cbielow / PTXQC

A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant
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[IDEA] Track potential confounders (operator, acquisition date, etc) #2

Open cbielow opened 8 years ago

cbielow commented 8 years ago

As suggested by a reviewer, it would be great to import and track meta information, such as

in the report (maybe side-by-side with the heatmap) -- or even via comparing a heatmap clustering (by rows) to any of these factors.

To ease burden on the user to enter the data, one could use a Raw file naming scheme template (regex with named groups?),

Raw file: “QExactive01_CB_20141123_SampleXY….raw” with scheme

(?<machine>.*)_(?<op>.*)_(?<date>.*)