Open cbird808 opened 3 years ago
fastp -i 20190905-PIRE-Ssp-A_P1P7-L4.F.fq.gz -I 20190905-PIRE-Ssp-A_P1P7-L4.R.fq.gz -o test_fastp-out/20190905-PIRE-Ssp-A_P1P7-L4.R1.fq.gz -O test_fastp-out/20190905-PIRE-Ssp-A_P1P7-L4.R2.fq.gz --compression 1 --verbose --detect_adapter_for_pe --cut_tail --cut_window_size 4 --cut_mean_quality 20 --length_required 75 --low_complexity_filter --complexity_threshold 30 --thread 40
fastp -i 20190905-PIRE-Ssp-A_P1P7-L4.F.fq.gz -I 20190905-PIRE-Ssp-A_P1P7-L4.R.fq.gz -o test_fastp-out/20190905-PIRE-Ssp-A_P1P7-L4.R1.fq.gz -O test_fastp-out/20190905-PIRE-Ssp-A_P1P7-L4.R2.fq.gz --compression 1 --verbose --detect_adapter_for_pe --cut_tail --cut_window_size 4 --cut_mean_quality 20 --length_required 75 --low_complexity_filter --complexity_threshold 30 --thread 40