CLEANUP: Replace single usage of BiocParallel::bpapply() with future.apply::future_lapply()

ccagc / QDNAseq

QDNAseq package for Bioconductor

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CLEANUP: Replace single usage of BiocParallel::bpapply() with future.apply::future_lapply() #76

Closed HenrikBengtsson closed 5 years ago

HenrikBengtsson commented 5 years ago

BiocParallel::bplapply() is used in internal function QDNAseq:::.binReadCountsPerChunk() called by QDNAseq::binReadCounts(). This can be replaced with future.apply::future_lapply(). This will simplify documentation/vignette on parallelization and it will allow us to drop dependency on BiocParallel and all of its dependencies.